C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 6B, cGMP-specific, rod, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429163 PDE6B-003 ENSG00000133256 9606 + 4:653180-670233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungOvaryPlacentaENST00000429163
Transcript ID Brain Breast Lung Ovary Placenta
ENST00000429163 4.767±0.00 0.210±0.00 0.259±0.17 0.443±0.30 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070Z CIL_00070Z_0002 CGP 4:625584-674338

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0005515 IEA protein binding
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031456 Pde6b-001 protein_coding Mus_musculus 0 2006
ENSMUST00000134865 Pde6b-002 retained_intron Mus_musculus 0 761
ENSMUST00000025956 Pde6c-201 protein_coding Mus_musculus 0 324
ENSMUST00000112329 Pde6c-202 protein_coding Mus_musculus 0 215

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