C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sad1 and UNC84 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429178 SUN1-008 ENSG00000164828 9606 + 7:843370-874899 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000429178
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000429178 8.155±0.00 4.960±0.00 4.107±0.79 12.543±0.00 5.735±0.00 3.484±1.48 4.575±0.00 8.413±0.00 14.401±5.44 7.044±1.64 6.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018K CIL_00018K_0001 CGP 7:726701-896435
CIL_00018J CIL_00018J_0001 CGP 7:816615-896436

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005639 IEA integral component of nuclear inner membrane
GO:0034993 IEA SUN-KASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110884 Sun1-003 protein_coding Mus_musculus 0 326
ENSMUST00000126110 Sun1-017 processed_transcript Mus_musculus 0 283
ENSMUST00000078690 Sun1-004 protein_coding Mus_musculus 0 250
ENSMUST00000110883 Sun1-002 protein_coding Mus_musculus 0 250
ENSMUST00000058716 Sun1-001 protein_coding Mus_musculus 0 250
ENSMUST00000110882 Sun1-005 protein_coding Mus_musculus 0 224
ENSMUST00000135926 Sun1-019 protein_coding Mus_musculus 0 220
ENSMUST00000126108 Sun1-020 retained_intron Mus_musculus 8e-34 150

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