C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429309 RPL30P4-001 ENSG00000237676 9606 - 3:32635222-32635554 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000429309
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000429309 0.205±0.00 0.254±0.00 0.042±0.00 0.599±0.00 0.074±0.00 0.084±0.00 0.038±0.00 0.250±0.00 0.379±0.00 0.079±0.00 0.338±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 435
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 435
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 424
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 403
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 396
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 388
ENSMUST00000160070 Rpl30-ps2-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000136653 Rpl30-006 retained_intron Mus_musculus 0 235
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0 211
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 0 189
ENSMUST00000117313 Gm13714-001 processed_pseudogene Mus_musculus 4.99997e-41 171

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