C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429552 RP4-814D15.2-001 ENSG00000225224 9606 + 7:157192368-157192832 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000429552
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000429552 0.114±0.00 0.121±0.00 1.470±0.00 0.206±0.06 0.400±0.28 0.511±0.29 0.204±0.15 0.270±0.00 0.222±0.00 0.503±0.47 0.659±0.42 0.321±0.00 0.877±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PG CIL_0007PG_0001 UCNEbase 7:156746986-157209208
CIL_0005Z2 CIL_0005Z2_0001 CGP 7:156994051-157269372

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 547
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 547
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 492
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000120658 Gm13622-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000160015 Gm16139-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000121696 Gm12882-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000185489 RP23-125B4.3-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 327
ENSMUST00000181136 Gm27018-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000117540 Gm13428-001 processed_pseudogene Mus_musculus 5e-33 145
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 8e-26 121
ENSMUST00000143418 Rps27a-001 processed_transcript Mus_musculus 0.000000000000003 86

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