C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25, member 40
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000429674 SLC25A40-004 ENSG00000075303 9606 - 7:87836168-87860598 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungMuscleENST00000429674
Transcript ID Bladder Brain Colon Lung Muscle
ENST00000429674 2.907±0.00 2.784±0.00 2.923±0.00 2.520±0.00 0.713±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052G CIL_00052G_0002 CGP 7:87627548-87876357
CIL_0004SW CIL_0004SW_0002 CGP 7:87833568-87909541

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066921 Slc25a40-201 protein_coding Mus_musculus 0 623
ENSMUST00000170496 Slc25a40-202 protein_coding Mus_musculus 0 623
ENSMUST00000188479 RP23-118M23.7-001 processed_pseudogene Mus_musculus 0 584

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