C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deltex 2, E3 ubiquitin ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430490 DTX2-004 ENSG00000091073 9606 + 7:76461727-76505991 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungOvaryPlacentaTestisENST00000430490
Transcript ID Breast Heart Liver Lung Ovary Placenta Testis
ENST00000430490 1.927±0.00 0.531±0.00 0.411±0.01 1.776±0.00 3.912±1.61 2.611±1.25 2.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E4 CIL_0006E4_0001 CGP 7:76397518-76505995
CIL_0000OE CIL_0000OE_0001 CGP 7:76461676-76516521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031965 IDA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111142 Dtx2-001 protein_coding Mus_musculus 0 1927
ENSMUST00000005072 Dtx2-005 protein_coding Mus_musculus 0 1925
ENSMUST00000125827 Dtx2-004 nonsense_mediated_decay Mus_musculus 0 1022
ENSMUST00000111145 Dtx2-002 protein_coding Mus_musculus 0 1020
ENSMUST00000111144 Dtx2-003 protein_coding Mus_musculus 0 979
ENSMUST00000142041 Dtx2-006 retained_intron Mus_musculus 0 756

Loading