C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAN binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430524 RANBP1-201 ENSG00000099901 9606 + 22:20115938-20127357 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000430524
Transcript ID Muscle
ENST00000430524 7.793±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KS CIL_0003KS_0002 CGP 22:20080232-20117392

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005813 IEA centrosome
GO:0007051 IEA spindle organization
GO:0046604 IEA positive regulation of mitotic centrosome separation
GO:0046907 IEA intracellular transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183528 RANBP1-001 protein_coding Mus_musculus 0 845
ENSMUST00000115645 Ranbp1-001 protein_coding Mus_musculus 0 845
ENSMUST00000185058 RANBP1-003 protein_coding Mus_musculus 0 841
ENSMUST00000052325 Ranbp1-003 protein_coding Mus_musculus 0 841
ENSMUST00000121155 Gm5391-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000184634 RANBP1-004 retained_intron Mus_musculus 0 379
ENSMUST00000123073 Ranbp1-004 retained_intron Mus_musculus 0 379
ENSMUST00000185140 RANBP1-002 processed_transcript Mus_musculus 0 374
ENSMUST00000134035 Ranbp1-002 processed_transcript Mus_musculus 0 374

Loading