C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AT rich interactive domain 1A (SWI-like)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430799 ARID1A-009 ENSG00000117713 9606 + 1:26771229-26781187 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeKidneyTestisENST00000430799
Transcript ID Adipose Kidney Testis
ENST00000430799 3.229±0.00 1.460±0.00 3.781±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0006338 IEA chromatin remodeling
GO:0090544 IEA BAF-type complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105897 Arid1a-201 protein_coding Mus_musculus 0 5411
ENSMUST00000145664 Arid1a-001 protein_coding Mus_musculus 0 5367
ENSMUST00000008024 Arid1a-002 protein_coding Mus_musculus 0 5365
ENSDART00000084263 arid1aa-201 protein_coding Danio_rerio 0 518
ENSDART00000135930 arid1aa-001 protein_coding Danio_rerio 0 518

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