C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431047 AC005534.6-001 ENSG00000234450 9606 + 7:156633355-156633787 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000431047
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000431047 0.064±0.00 0.337±0.00 0.464±0.26 0.542±0.24 0.095±0.00 0.090±0.00 0.236±0.00 0.378±0.15 0.546±0.00 0.087±0.00 0.222±0.10 0.143±0.00 0.085±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00026H CIL_00026H_0001 CGP 7:155799986-156677130

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167436 Rpl26-201 protein_coding Mus_musculus 0 420
ENSMUST00000073471 Rpl26-001 protein_coding Mus_musculus 0 420
ENSMUST00000118533 Gm15772-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000118781 Gm11826-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000183196 Gm10136-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000122220 Rpl26-ps5-001 processed_pseudogene Mus_musculus 0 388
ENSMUST00000101014 Rpl26-002 protein_coding Mus_musculus 0 387
ENSMUST00000085379 Rpl26-ps2-201 processed_pseudogene Mus_musculus 0 381
ENSMUST00000170279 Rpl26-ps4-201 processed_pseudogene Mus_musculus 0 348
ENSMUST00000118045 Gm15896-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000128952 Rpl26-003 protein_coding Mus_musculus 0 311
ENSMUST00000122414 Gm11506-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000118803 Gm12311-001 processed_pseudogene Mus_musculus 1e-33 147

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