C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 6 (neurotransmitter transporter), member 10, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431994 SLC6A10P-001 ENSG00000214617 9606 - 16:32878706-32885501 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000431994
Transcript ID Brain
ENST00000431994 0.032±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114467 Slc6a8-201 protein_coding Mus_musculus 0 2595
ENSMUST00000114465 Slc6a8-002 protein_coding Mus_musculus 0 2595
ENSMUST00000033752 Slc6a8-001 protein_coding Mus_musculus 0 2531
ENSMUST00000164449 Slc6a8-006 protein_coding Mus_musculus 0 2407
ENSMUST00000168831 Slc6a8-003 protein_coding Mus_musculus 0 2392
ENSMUST00000114464 Slc6a8-004 nonsense_mediated_decay Mus_musculus 0 1775
ENSMUST00000170614 Slc6a8-009 retained_intron Mus_musculus 0 1469
ENSMUST00000168764 Slc6a8-013 retained_intron Mus_musculus 0 773
ENSMUST00000146796 Slc6a8-011 retained_intron Mus_musculus 0 741
ENSMUST00000171398 Slc6a8-012 protein_coding Mus_musculus 0 604
ENSMUST00000166200 Slc6a8-010 processed_transcript Mus_musculus 0 516
ENSMUST00000167828 Slc6a8-014 retained_intron Mus_musculus 0 411
ENSMUST00000170574 Slc6a8-015 retained_intron Mus_musculus 0 303
ENSDART00000092131 si:ch211-117c9.5-001 protein_coding Danio_rerio 4.2039e-45 187
ENSDART00000149136 si:ch211-117c9.5-002 protein_coding Danio_rerio 8e-22 110
ENSMUST00000124406 Slc6a19-005 nonsense_mediated_decay Mus_musculus 0.000000005 68
ENSMUST00000132085 Slc6a19-003 retained_intron Mus_musculus 0.000000005 68
ENSMUST00000022048 Slc6a19-001 protein_coding Mus_musculus 0.000000005 68

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