C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and coiled-coil domain family 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432054 TMCC1-002 ENSG00000172765 9606 - 3:129647792-129688732 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLiverLungMuscleOvaryENST00000432054
Transcript ID Breast Heart Kidney Liver Lung Muscle Ovary
ENST00000432054 0.628±0.00 0.461±0.00 0.607±0.00 0.395±0.00 0.514±0.00 0.525±0.00 0.815±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000315 CIL_000315_0001 CGP 3:129555175-129893576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172510 Tmcc1-008 protein_coding Mus_musculus 0 2566
ENSMUST00000088896 Tmcc1-001 protein_coding Mus_musculus 0 2507
ENSMUST00000032222 Tmcc1-003 protein_coding Mus_musculus 0 2396
ENSMUST00000173110 Tmcc1-004 nonsense_mediated_decay Mus_musculus 0 2278
ENSMUST00000173548 Tmcc1-007 processed_transcript Mus_musculus 0 1029
ENSMUST00000173140 Tmcc1-009 protein_coding Mus_musculus 0 835

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