C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde-3-phosphate dehydrogenase pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432206 GAPDHP2-001 ENSG00000236811 9606 + 20:13392677-13393674 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000432206
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000432206 0.171±0.00 0.144±0.00 0.049±0.00 0.136±0.00 0.052±0.00 0.015±0.00 0.111±0.00 0.215±0.00 0.030±0.01 0.045±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000442 CIL_000442_0001 CGP 20:13221771-13638940
CIL_0002DC CIL_0002DC_0001 CGP 20:13389392-13784886

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 928
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 928
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 928
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 928
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 928
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000119266 Gm12537-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 920
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 917
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 911
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 911
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 907
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 905
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 900
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 900
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 900
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 900
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 898
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 896
ENSMUST00000076317 Gm10293-001 processed_pseudogene Mus_musculus 0 894
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 894
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 893
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 887
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 883
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 878
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 872
ENSMUST00000120911 Gm12416-001 processed_pseudogene Mus_musculus 0 870
ENSMUST00000091897 Gm5507-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 867
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 865
ENSMUST00000182463 Gm3671-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000099956 Gm8055-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000120200 Gm11557-001 processed_pseudogene Mus_musculus 0 854
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 852
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 839
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 821
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 817
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 815
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000082064 Gm6316-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000183053 Gm7507-001 processed_pseudogene Mus_musculus 0 800
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000182691 Gm7286-001 processed_pseudogene Mus_musculus 0 798
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 793
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 787
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000118417 Gm14130-001 processed_pseudogene Mus_musculus 0 774
ENSMUST00000122453 Gm12017-001 processed_pseudogene Mus_musculus 0 771
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000118789 Gm6322-001 processed_pseudogene Mus_musculus 0 752
ENSMUST00000182514 Gm9568-001 processed_pseudogene Mus_musculus 0 750
ENSMUST00000183329 Gm7985-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 747
ENSMUST00000182724 Gm9149-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000181978 Gm8927-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000180794 Gm5976-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000182369 Gm6283-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000182707 Gm9061-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000190835 RP24-347J6.3-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 712
ENSMUST00000118730 Gm13326-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 704
ENSMUST00000120199 Gm12969-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000121385 Gm12464-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000184810 Gm11214-001 translated_processed_pseudogene Mus_musculus 0 675
ENSMUST00000182279 Gm4891-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000182375 Gm8492-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000118792 Gm18859-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 656
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 654
ENSMUST00000183257 Gm7693-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182176 Gm26956-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182835 Gm5839-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000182235 Gm7745-001 processed_pseudogene Mus_musculus 0 649
ENSMUST00000122068 Gm11960-001 transcribed_processed_pseudogene Mus_musculus 0 647
ENSMUST00000181063 Gm11960-002 processed_transcript Mus_musculus 0 647
ENSMUST00000181445 Gm7741-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000184486 Gm12117-001 translated_processed_pseudogene Mus_musculus 0 641
ENSMUST00000183092 Gm5177-001 transcribed_processed_pseudogene Mus_musculus 0 634
ENSMUST00000183337 Gm5177-002 processed_transcript Mus_musculus 0 634
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 632
ENSMUST00000117854 Gm13296-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000181990 Gm4823-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000182220 Gm7763-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000117214 Gm13870-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000120570 4930448K20Rik-001 transcribed_processed_pseudogene Mus_musculus 0 584
ENSMUST00000182482 Gm9022-001 transcribed_processed_pseudogene Mus_musculus 0 582
ENSMUST00000183173 Gm9423-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000182285 Gm9381-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000119554 Gm9439-001 processed_pseudogene Mus_musculus 0 575
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000122132 Gm14006-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000182857 Gm18822-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000183151 Gm26977-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000182057 Gm5350-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000182082 Gm8957-001 processed_pseudogene Mus_musculus 0 531
ENSMUST00000182472 Gm6114-001 processed_pseudogene Mus_musculus 0 501
ENSMUST00000182302 Gm7132-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000184252 Gm11214-002 protein_coding Mus_musculus 0 446
ENSMUST00000182528 Gm8614-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000182990 Gm26970-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000118893 Gm15957-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000182929 Gm26976-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000183831 Gm12117-002 protein_coding Mus_musculus 0 364
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 0 357
ENSMUST00000182394 Gm9522-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000187802 RP24-369P14.2-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000118210 Gm11550-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000159905 Gm16296-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000182783 Gm27005-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000117238 Gm13761-001 processed_pseudogene Mus_musculus 3e-38 163
ENSMUST00000186767 RP24-468E2.1-001 unprocessed_pseudogene Mus_musculus 1e-21 108

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