C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: raftlin, lipid raft linker 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432519 RFTN1-002 ENSG00000131378 9606 - 3:16315845-16482865 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverMuscleOvaryENST00000432519
Transcript ID Adrenal Brain Breast Kidney Liver Muscle Ovary
ENST00000432519 4.587±0.00 0.979±0.00 4.513±3.15 2.403±0.00 3.465±0.00 1.798±0.00 8.200±1.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HO CIL_0004HO_0001 CGP 3:16257978-16350299
CIL_0002VD CIL_0002VD_0002 CGP 3:16265199-16514026
CIL_0002VC CIL_0002VC_0002 CGP 3:16313574-16670306

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044503 Rftn1-001 protein_coding Mus_musculus 0 972
ENSMUST00000113195 Rftn1-002 protein_coding Mus_musculus 0 826
ENSMUST00000156094 Rftn1-003 retained_intron Mus_musculus 0 627

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