C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: homeobox D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432796 HOXD3-002 ENSG00000128652 9606 + 2:176136957-176169415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000432796
Transcript ID Breast
ENST00000432796 2.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_00017M CIL_00017M_0001 CGP 2:176129694-176173102

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111983 Hoxd3-001 protein_coding Mus_musculus 0 472
ENSMUST00000053932 HOXD3-001 nonsense_mediated_decay Mus_musculus 0 453
ENSMUST00000047830 Hoxd3-005 protein_coding Mus_musculus 0 453
ENSMUST00000111982 Hoxd3-004 protein_coding Mus_musculus 0 453
ENSMUST00000144544 Hoxd3-006 protein_coding Mus_musculus 0 322

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