C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GTP binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432918 GTPBP2-005 ENSG00000172432 9606 - 6:43620490-43622804 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyENST00000432918
Transcript ID Bladder Kidney
ENST00000432918 0.945±0.00 3.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YI CIL_0008YI_0001 VISTA 6:43493027-44094540

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024748 Gtpbp2-001 protein_coding Mus_musculus 0 699
ENSMUST00000169383 Gtpbp2-002 nonsense_mediated_decay Mus_musculus 0 699
ENSMUST00000169798 Gtpbp2-016 retained_intron Mus_musculus 0 473
ENSMUST00000166701 Gtpbp2-015 protein_coding Mus_musculus 0 464
ENSMUST00000167681 Gtpbp2-014 retained_intron Mus_musculus 0 453
ENSMUST00000172170 Gtpbp2-004 protein_coding Mus_musculus 0 453
ENSMUST00000169778 Gtpbp2-011 retained_intron Mus_musculus 0 448
ENSMUST00000166663 Gtpbp2-017 retained_intron Mus_musculus 0 324
ENSMUST00000163941 Gtpbp2-012 retained_intron Mus_musculus 4e-34 150
ENSMUST00000166252 Gtpbp2-013 nonsense_mediated_decay Mus_musculus 2e-31 141

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