C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434031 RPL15-014 ENSG00000174748 9606 + 3:23916979-23919409 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonLungMuscleOvaryENST00000434031
Transcript ID Bladder Breast Colon Lung Muscle Ovary
ENST00000434031 19.245±0.00 71.337±0.00 47.472±0.00 55.055±0.00 42.885±0.00 61.487±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EM CIL_0002EM_0002 CGP 3:23891660-23946591
CIL_0002VH CIL_0002VH_0002 CGP 3:23916545-23980618

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079419 Rpl15-004 protein_coding Mus_musculus 0 778
ENSMUST00000112598 Rpl15-005 protein_coding Mus_musculus 0 771
ENSMUST00000080281 Rpl15-001 protein_coding Mus_musculus 0 771
ENSMUST00000100799 Rpl15-002 protein_coding Mus_musculus 0 769
ENSMUST00000105169 Gm4294-201 processed_pseudogene Mus_musculus 0 756
ENSMUST00000088480 Rpl15-ps3-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000081993 Gm10020-201 protein_coding Mus_musculus 0 750
ENSMUST00000184247 Rpl15-ps2-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000119496 Gm10224-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000097103 Gm8420-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000120953 Gm13413-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000121621 Gm12726-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000117717 Gm14094-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000189382 RP23-277E3.1-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000122161 Gm16210-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000121557 Gm13688-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000073317 Gm5292-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000121890 Gm12035-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000118944 Gm15400-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000117231 Gm11191-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000147121 Rpl15-003 protein_coding Mus_musculus 0 449
ENSMUST00000118237 Gm11500-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000120694 Rpl15-ps1-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000122372 Rpl15-ps4-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000159873 Gm3329-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000132957 Gm15733-001 processed_pseudogene Mus_musculus 0 213

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