C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium channel tetramerization domain containing 9 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434597 KCTD9P3-001 ENSG00000187988 9606 + 9:37477149-37478317 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleENST00000434597
Transcript ID Brain Colon Muscle
ENST00000434597 0.020±0.00 0.199±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000843 CIL_000843_0001 VISTA 9:36915019-37515778
CIL_0008YP CIL_0008YP_0001 VISTA 9:36951210-37552226
CIL_00080S CIL_00080S_0001 VISTA 9:37036633-37638309
CIL_0001OS CIL_0001OS_0001 CGP 9:37438114-37503697

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150768 Kctd9-006 protein_coding Mus_musculus 0 1472
ENSMUST00000156700 Kctd9-002 nonsense_mediated_decay Mus_musculus 0 1127
ENSMUST00000152243 Kctd9-003 protein_coding Mus_musculus 0 998
ENSMUST00000078053 Kctd9-001 protein_coding Mus_musculus 0 848
ENSMUST00000145542 Kctd9-005 protein_coding Mus_musculus 0 492
ENSMUST00000125212 Kctd9-004 protein_coding Mus_musculus 0 398

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