C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S20 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434808 RPS20P5-001 ENSG00000236888 9606 - 1:57605847-57606206 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonKidneyMuscleOvaryENST00000434808
Transcript ID Bladder Breast Colon Kidney Muscle Ovary
ENST00000434808 0.368±0.00 0.280±0.00 0.033±0.00 0.036±0.00 0.032±0.00 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005G CIL_00005G_0002 CGP 1:56929210-58546734
CIL_00005F CIL_00005F_0002 CGP 1:56994778-58546802

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103009 Rps20-002 retained_intron Mus_musculus 0 333
ENSMUST00000138502 Rps20-001 protein_coding Mus_musculus 0 333
ENSMUST00000130128 Rps20-003 retained_intron Mus_musculus 0 289

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