C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434827 CTA-246H3.11-001 ENSG00000231466 9606 - 22:25349543-25350322 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000434827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000434827 0.015±0.00 0.725±0.00 0.318±0.00 0.156±0.00 0.228±0.07 0.395±0.00 0.078±0.02 0.337±0.02 0.041±0.00 0.565±0.00 0.014±0.00 0.367±0.33 0.028±0.00 0.226±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095C CIL_00095C_0001 VISTA 22:24783488-25386391

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024657 Phf10-001 protein_coding Mus_musculus 0 793
ENSMUST00000168938 Phf10-002 nonsense_mediated_decay Mus_musculus 0 496
ENSMUST00000174163 1600012H06Rik-004 processed_transcript Mus_musculus 1e-26 124

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