C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit F pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434851 EIF3FP3-001 ENSG00000233426 9606 + 2:58251440-58252525 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENST00000434851
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000434851 0.018±0.00 0.057±0.00 0.066±0.00 0.449±0.41 0.099±0.06 0.545±0.51 0.122±0.10 0.426±0.41 0.017±0.00 0.358±0.29 3.669±4.66 2.368±2.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LM CIL_0007LM_0001 UCNEbase 2:57740887-60568309
CIL_0007WS CIL_0007WS_0001 VISTA 2:57829929-58432668
CIL_0009CV CIL_0009CV_0001 VISTA 2:58168684-58770188
CIL_0009DC CIL_0009DC_0001 VISTA 2:58221205-58823005
CIL_0007Z0 CIL_0007Z0_0001 VISTA 2:58243169-58844155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033342 Eif3f-001 protein_coding Mus_musculus 0 1136
ENSMUST00000153596 Eif3f-002 retained_intron Mus_musculus 0 326
ENSMUST00000147369 Eif3f-003 retained_intron Mus_musculus 0 292

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