C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: claudin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435050 CLDN4-002 ENSG00000189143 9606 + 7:73827744-73832684 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 IMP integral component of plasma membrane
GO:0005923 ISS tight junction
GO:0007165 TAS signal transduction
GO:0007565 IEA female pregnancy
GO:0009925 IEA basal plasma membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0016327 IEA apicolateral plasma membrane
GO:0016328 IEA lateral plasma membrane
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0032570 IEA response to progesterone
GO:0042802 ISS identical protein binding
GO:0061436 IMP establishment of skin barrier

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094245 Cldn3-001 protein_coding Mus_musculus 0 344
ENSMUST00000051401 Cldn4-201 protein_coding Mus_musculus 3e-19 102
ENSMUST00000027056 Prex2-001 protein_coding Mus_musculus 0.0003 53

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