C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435137 RP11-280O24.3-001 ENSG00000234982 9606 + 9:14204248-14205039 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000435137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000435137 0.088±0.00 0.468±0.00 0.163±0.00 0.129±0.00 0.167±0.02 0.181±0.00 0.123±0.10 0.097±0.00 0.105±0.00 0.339±0.06 0.184±0.00 0.178±0.14 0.208±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000746 CIL_000746_0001 CGP 9:13105704-14398983
CIL_0007VJ CIL_0007VJ_0001 VISTA 9:13639548-14240364
CIL_000143 CIL_000143_0001 CGP 9:14081843-14693471
CIL_0007O1 CIL_0007O1_0001 UCNEbase 9:14082259-14308187

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094754 Rpl7a-ps8-201 protein_coding Mus_musculus 0 747
ENSMUST00000121575 Gm12630-001 processed_pseudogene Mus_musculus 0 678
ENSMUST00000121278 Gm13726-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000185009 Gm14214-001 translated_processed_pseudogene Mus_musculus 0 556
ENSMUST00000117118 Rpl7a-ps9-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000117439 Gm12385-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000117903 Gm8097-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000117904 Gm14893-001 processed_pseudogene Mus_musculus 0.0000000005 69
ENSMUST00000119680 Gm15702-001 processed_pseudogene Mus_musculus 0.00000008 62

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