C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTAGE family, member 16, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435601 CTAGE16P-001 ENSG00000214335 9606 + 13:58528615-58531026 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyLungOvaryPlacentaTestisENST00000435601
Transcript ID Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000435601 0.012±0.00 0.012±0.00 0.005±0.00 0.018±0.00 0.011±0.00 0.028±0.01 0.966±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MF CIL_0000MF_0001 CGP 13:57631810-60163987

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000176464 Ctage5-011 protein_coding Mus_musculus 0 1690
ENSMUST00000175912 Ctage5-003 protein_coding Mus_musculus 0 1677
ENSMUST00000176752 Ctage5-004 nonsense_mediated_decay Mus_musculus 0 1648
ENSMUST00000170992 Ctage5-007 protein_coding Mus_musculus 0 1511
ENSMUST00000176892 Ctage5-002 protein_coding Mus_musculus 0 1511
ENSMUST00000176322 Ctage5-008 protein_coding Mus_musculus 0 1509
ENSMUST00000069430 Ctage5-001 protein_coding Mus_musculus 0 1509
ENSMUST00000176617 Ctage5-014 nonsense_mediated_decay Mus_musculus 0 1330
ENSMUST00000176336 Ctage5-013 nonsense_mediated_decay Mus_musculus 0 1094
ENSMUST00000177162 Ctage5-012 protein_coding Mus_musculus 0 1005
ENSMUST00000177225 Ctage5-006 protein_coding Mus_musculus 0 992
ENSMUST00000175877 Ctage5-010 protein_coding Mus_musculus 0 826
ENSMUST00000175837 Ctage5-021 nonsense_mediated_decay Mus_musculus 0 361
ENSMUST00000175659 Ctage5-015 retained_intron Mus_musculus 0 320

Loading