C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15a pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436276 RPS15AP5-001 ENSG00000223540 9606 + 10:121713607-121713994 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungMuscleOvaryPlacentaTestisENST00000436276
Transcript ID Liver Lung Muscle Ovary Placenta Testis
ENST00000436276 0.032±0.00 0.034±0.00 0.063±0.00 0.084±0.00 0.084±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BE CIL_0001BE_0001 CGP 10:121478334-121928801
CIL_00095T CIL_00095T_0001 VISTA 10:121499915-122101503

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172457 Rps15a-201 protein_coding Mus_musculus 0 350
ENSMUST00000106588 Rps15a-004 protein_coding Mus_musculus 0 350
ENSMUST00000131374 Rps15a-001 protein_coding Mus_musculus 0 350
ENSMUST00000117476 Rps15a-ps6-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000087473 Rps15a-ps2-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000121072 Rps15a-ps3-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000132586 Rps15a-ps5-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000182051 Gm26983-001 processed_pseudogene Mus_musculus 0 322
ENSDART00000128613 rps15a-001 protein_coding Danio_rerio 0 289

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