C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | caldesmon 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000436461  |
CALD1-012 |
ENSG00000122786 |
9606 | + |
7:134745467-134960056  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00024W | CIL_00024W_0002 | CGP | 7:134646808-134970728 |
| CIL_0002H0 | CIL_0002H0_0001 | CGP | 7:134744252-135147963 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003779 | IEA | actin binding |
| GO:0005516 | IEA | calmodulin binding |
| GO:0005886 | IDA | plasma membrane |
| GO:0006936 | IEA | muscle contraction |
| GO:0015629 | IDA | actin cytoskeleton |
| GO:0017022 | IEA | myosin binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000079391
|
Cald1-002 | protein_coding | Mus_musculus | 0 | 1404 |
|
ENSMUST00000115026
|
Cald1-015 | protein_coding | Mus_musculus | 0 | 1387 |
|
ENSMUST00000149009
|
Cald1-016 | nonsense_mediated_decay | Mus_musculus | 0 | 1291 |
|
ENSMUST00000115021
|
Cald1-001 | protein_coding | Mus_musculus | 0 | 1275 |
|
ENSMUST00000031775
|
Cald1-014 | protein_coding | Mus_musculus | 0 | 856 |
|
ENSMUST00000115027
|
Cald1-006 | protein_coding | Mus_musculus | 0 | 856 |
|
ENSMUST00000142512
|
Cald1-007 | protein_coding | Mus_musculus | 0 | 760 |
|
ENSMUST00000142716
|
Cald1-010 | protein_coding | Mus_musculus | 0 | 656 |
|
ENSMUST00000123823
|
Cald1-009 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000126181
|
Cald1-012 | protein_coding | Mus_musculus | 0 | 342 |
|
ENSMUST00000136907
|
Cald1-005 | protein_coding | Mus_musculus | 0 | 342 |
