C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glyceraldehyde 3 phosphate dehydrogenase pseudogene 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436626 GAPDHP48-001 ENSG00000232718 9606 - 2:3688021-3688981 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverOvaryTestisENST00000436626
Transcript ID Brain Breast Kidney Liver Ovary Testis
ENST00000436626 0.069±0.00 0.149±0.00 0.111±0.00 0.013±0.00 0.037±0.00 0.411±0.32

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119246 Gm12286-001 processed_pseudogene Mus_musculus 0 640
ENSMUST00000108740 Gm10358-201 processed_pseudogene Mus_musculus 0 640
ENSMUST00000180167 Gm10359-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000119978 Gm12671-001 processed_pseudogene Mus_musculus 0 634
ENSMUST00000107041 Gm7336-201 processed_pseudogene Mus_musculus 0 634
ENSMUST00000073605 Gapdh-201 protein_coding Mus_musculus 0 634
ENSMUST00000118875 Gapdh-001 protein_coding Mus_musculus 0 634
ENSMUST00000117757 Gapdh-003 protein_coding Mus_musculus 0 634
ENSMUST00000100754 Gm2606-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000121831 Gm14760-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000106443 Gm4609-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000180654 Gm12033-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000113842 Gm5138-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000181181 Gm3272-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000119551 Gm12070-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000182336 Gm5652-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000180755 Gm5559-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000181051 Gm2574-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000179228 Gm10481-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000121658 Gm13394-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000120886 Gm13882-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000071282 Gm3222-201 processed_pseudogene Mus_musculus 0 627
ENSMUST00000180966 Gm20899-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000120014 Gm13292-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000182991 Gm4575-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000182581 Gm4335-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000166539 Gm2308-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000122433 Gm14148-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000145057 Gm10284-001 processed_pseudogene Mus_musculus 0 612
ENSMUST00000094175 Gm10291-201 processed_pseudogene Mus_musculus 0 606
ENSMUST00000077127 Gm3839-201 processed_pseudogene Mus_musculus 0 606
ENSMUST00000181173 Gm3839-001 protein_coding Mus_musculus 0 606
ENSMUST00000121760 Gm5863-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000182339 Gm4691-001 transcribed_processed_pseudogene Mus_musculus 0 603
ENSMUST00000182989 Gm4691-002 processed_transcript Mus_musculus 0 603
ENSMUST00000087222 Gm3695-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000105222 Gm10327-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000182467 Gm6981-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000182522 Gm3534-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000181493 Gm3200-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000180973 Gm3809-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000182720 Gm8349-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000182266 Gm2467-001 processed_pseudogene Mus_musculus 0 582
ENSMUST00000182243 Gm4217-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000182630 Gm2546-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000050581 Gm5069-002 protein_coding Mus_musculus 0 562
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000095320 Gm10313-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000117318 Gm11453-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000117933 Gm15191-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000089534 Gm7293-201 protein_coding Mus_musculus 0 560
ENSMUST00000182798 Gm2445-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000119418 Gm13464-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000117732 Gm11185-001 processed_pseudogene Mus_musculus 0 551
ENSMUST00000183246 Gm2193-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000118653 Gm8864-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000183305 Gm4654-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000117402 Gm7129-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000182456 Gm16470-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000119851 Gm14111-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000183272 Gapdh-017 protein_coding Mus_musculus 0 536
ENSMUST00000183250 Gm8756-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000122352 Gm11953-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000182346 Gm9081-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000121506 Gm5270-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000182847 Gm4812-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000182525 Gm5430-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000095717 Gm4795-001 processed_pseudogene Mus_musculus 0 516
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 512
ENSMUST00000118182 Gm5944-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000181413 Gm6498-002 transcribed_processed_pseudogene Mus_musculus 0 503
ENSMUST00000118148 Gm13592-001 processed_pseudogene Mus_musculus 0 503
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000118675 Gm12684-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000182449 Gm6944-001 processed_pseudogene Mus_musculus 0 496
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000183076 Gm5345-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000182237 Gm6946-001 processed_pseudogene Mus_musculus 0 472
ENSMUST00000183092 Gm5177-001 transcribed_processed_pseudogene Mus_musculus 0 470
ENSMUST00000183337 Gm5177-002 processed_transcript Mus_musculus 0 470
ENSMUST00000182941 Gm7583-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000117317 Gm5187-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000182678 Gm7191-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000064353 Gm8174-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000182638 Gm4518-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000182906 Gm8100-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000183259 Gm8565-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000120913 Gm11658-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000182954 Gm8318-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000163135 Gm17068-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000081029 Gm6498-001 processed_transcript Mus_musculus 0 442
ENSMUST00000182962 Gm8824-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000182240 Gm8907-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000183049 Gm5787-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000182716 Gm6771-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000182893 Gm5313-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000183159 Gm6317-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000182434 Gm8245-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000180769 Gm7784-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000118643 Gm14921-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000118688 Gm8661-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000121384 Gm12403-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000118177 Gm15294-001 translated_processed_pseudogene Mus_musculus 0 388
ENSMUST00000187161 RP24-347J6.5-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000180655 Gm5262-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000182698 Gm4398-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000106038 RP24-347J6.6-001 processed_pseudogene Mus_musculus 0 355
ENSMUST00000188041 RP24-347J6.4-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000183298 Gm8529-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000120728 Gm16177-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000182377 Gm6773-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000144205 Gapdh-005 processed_transcript Mus_musculus 0 326
ENSMUST00000182730 Gm5272-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000116649 Gm12419-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000181451 Gm8941-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000182641 Gm5274-001 processed_pseudogene Mus_musculus 0 311
ENSMUST00000182069 Gm18848-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000183067 Gm9358-001 processed_pseudogene Mus_musculus 0 278
ENSMUST00000185454 RP24-255L24.1-001 processed_pseudogene Mus_musculus 0 274
ENSMUST00000117538 Gm11996-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000182466 Gm17800-001 processed_pseudogene Mus_musculus 0 267
ENSMUST00000182391 Gm26913-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000182464 Gapdh-013 retained_intron Mus_musculus 0 250
ENSMUST00000182807 Gm27043-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000180888 Gm9499-001 processed_pseudogene Mus_musculus 2.99878e-43 180
ENSMUST00000182079 Gm15294-002 protein_coding Mus_musculus 9.99967e-42 174
ENSMUST00000178571 RP24-542I6.2-001 processed_pseudogene Mus_musculus 4.99997e-41 172

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