C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoserine phosphatase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437355 PSPH-012 ENSG00000146733 9606 - 7:56011051-56051448 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungMuscleOvaryPlacentaTestisENST00000437355
Transcript ID Brain Kidney Lung Muscle Ovary Placenta Testis
ENST00000437355 1.251±0.00 1.302±0.37 0.748±0.00 2.894±0.81 12.571±3.33 0.872±0.00 4.198±3.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000645 CIL_000645_0001 CGP 7:56011051-56063989

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA:IEA magnesium ion binding
GO:0004647 IEA:IDA phosphoserine phosphatase activity
GO:0005509 IDA calcium ion binding
GO:0005737 IBA:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006563 IDA L-serine metabolic process
GO:0006564 IEA:IBA L-serine biosynthetic process
GO:0008152 IEA metabolic process
GO:0008253 IEA 5'-nucleotidase activity
GO:0008652 TAS cellular amino acid biosynthetic process
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042803 IPI protein homodimerization activity
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031399 Psph-001 protein_coding Mus_musculus 0 776
ENSMUST00000118268 Psph-004 protein_coding Mus_musculus 0 289
ENSMUST00000136507 Psph-002 protein_coding Mus_musculus 0 230

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