C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyl aminopeptidase (aminopeptidase B)-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437406 RNPEPL1-004 ENSG00000142327 9606 + 2:240575502-240578724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000437406
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000437406 22.527±0.00 29.322±0.00 29.312±27.04 24.508±0.00 16.363±14.83 35.850±0.00 19.565±0.00 22.260±0.00 27.122±0.00 20.049±10.70 21.293±2.79 18.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AE CIL_0009AE_0001 VISTA 2:240068562-240673577
CIL_0004UD CIL_0004UD_0002 CGP 2:240435671-240569209
CIL_0003MW CIL_0003MW_0001 CGP 2:240479422-240569209
CIL_0003MH CIL_0003MH_0001 CGP 2:240560054-240581372
CIL_0003NU CIL_0003NU_0001 CGP 2:240565804-240617705

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0006508 IEA proteolysis
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0019370 IEA leukotriene biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179127 Rnpepl1-004 protein_coding Mus_musculus 0 1144
ENSMUST00000179854 Rnpepl1-002 retained_intron Mus_musculus 0 976
ENSMUST00000027487 Rnpepl1-001 protein_coding Mus_musculus 0 976
ENSMUST00000178816 Rnpepl1-003 retained_intron Mus_musculus 0 939
ENSMUST00000179531 Rnpepl1-005 nonsense_mediated_decay Mus_musculus 0 449
ENSMUST00000178778 Rnpepl1-010 retained_intron Mus_musculus 0 302
ENSMUST00000178662 Rnpepl1-012 retained_intron Mus_musculus 0 244
ENSMUST00000179837 Rnpepl1-011 protein_coding Mus_musculus 6.00036e-42 176

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