C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438419 TRAPPC13-004 ENSG00000113597 9606 + 5:65625034-65664764 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungOvaryPlacentaTestisENST00000438419
Transcript ID Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000438419 2.546±0.00 2.284±0.00 2.718±0.00 1.988±0.00 2.937±0.00 2.847±0.00 1.216±0.04 3.175±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G9 CIL_0007G9_0002 CGP 5:65563236-65625975

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022224 Trappc13-003 protein_coding Mus_musculus 0 1598
ENSMUST00000141557 Trappc13-002 protein_coding Mus_musculus 0 1580
ENSMUST00000179891 Trappc13-201 protein_coding Mus_musculus 0 1548
ENSMUST00000144060 Trappc13-001 protein_coding Mus_musculus 0 1482
ENSMUST00000142745 Trappc13-005 retained_intron Mus_musculus 0 418
ENSMUST00000133280 Trappc13-004 processed_transcript Mus_musculus 2e-17 95

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