C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP2/Sun domain family, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438747 NSUN5-001 ENSG00000130305 9606 - 7:73303230-73308867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438747
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438747 4.781±0.00 2.561±0.11 1.812±0.00 2.155±0.00 1.116±0.50 2.071±0.00 2.145±0.00 1.946±0.67 8.335±0.00 11.679±7.33 9.593±1.30 8.140±2.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UT CIL_0005UT_0001 CGP 7:72959485-73308867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000940 Nsun5-001 protein_coding Mus_musculus 0 1258
ENSMUST00000141867 Nsun5-004 retained_intron Mus_musculus 0 451
ENSMUST00000126454 Nsun5-005 retained_intron Mus_musculus 0 342

Loading