C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trafficking protein particle complex 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438773 TRAPPC9-002 ENSG00000167632 9606 - 8:139730345-140457762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438773 3.568±0.00 3.549±0.00 2.343±0.00 3.735±1.76 3.064±0.54 1.391±0.00 2.681±1.40 3.128±1.51 2.046±0.40 3.461±0.67 13.960±9.60 3.290±1.87 3.454±0.28 5.161±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Q0 CIL_0004Q0_0001 CGP 8:139600838-140458579
CIL_0002Y5 CIL_0002Y5_0001 CGP 8:139730343-140517137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089770 Trappc9-202 protein_coding Mus_musculus 0 3273
ENSMUST00000023276 Trappc9-201 protein_coding Mus_musculus 0 2795
ENSMUST00000170633 Trappc9-204 protein_coding Mus_musculus 0 2497
ENSMUST00000168191 Trappc9-203 protein_coding Mus_musculus 0 2344

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