C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pecanex-like 3 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439247 PCNXL3-003 ENSG00000197136 9606 + 11:65626853-65637305 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000439247
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000439247 2.509±0.00 3.275±0.00 1.719±0.50 2.845±0.00 2.453±0.00 0.714±0.57 2.892±2.51 2.282±1.67 3.520±0.00 1.910±0.00 5.108±2.52 4.150±0.88 6.306±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068169 Pcnxl3-004 protein_coding Mus_musculus 0 3258
ENSMUST00000113615 Pcnxl3-001 protein_coding Mus_musculus 0 3258
ENSMUST00000146638 Pcnxl3-006 retained_intron Mus_musculus 0 2844
ENSMUST00000021567 Pcnx-201 protein_coding Mus_musculus 0 800
ENSMUST00000145270 Pcnxl3-005 protein_coding Mus_musculus 0 599
ENSMUST00000133136 Pcnxl3-013 nonsense_mediated_decay Mus_musculus 0 518
ENSMUST00000120589 Pcnxl2-003 retained_intron Mus_musculus 0 411
ENSMUST00000047239 Pcnxl2-002 protein_coding Mus_musculus 0 411
ENSMUST00000124905 Pcnxl3-012 retained_intron Mus_musculus 0 366
ENSMUST00000132420 Pcnxl3-011 retained_intron Mus_musculus 0 361
ENSMUST00000137313 Pcnxl3-010 protein_coding Mus_musculus 0 350
ENSMUST00000119305 Pcnxl2-004 retained_intron Mus_musculus 0 302
ENSDART00000126141 CABZ01092745.1-201 protein_coding Danio_rerio 0.000006 55

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