C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439549 RP11-259P15.1-001 ENSG00000213157 9606 - 3:180887677-180888075 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000439549
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000439549 0.152±0.00 0.122±0.00 0.042±0.00 0.289±0.00 0.115±0.00 0.035±0.00 0.041±0.00 0.143±0.00 0.103±0.00 0.642±0.00 0.181±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081N CIL_00081N_0001 VISTA 3:180418639-181020170
CIL_00081O CIL_00081O_0001 VISTA 3:180444037-181045086
CIL_0001FR CIL_0001FR_0001 CGP 3:180602858-180982753
CIL_0007MF CIL_0007MF_0001 UCNEbase 3:180719005-182597004
CIL_0008UV CIL_0008UV_0001 VISTA 3:180755851-181358014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081840 Rpl32-001 protein_coding Mus_musculus 0 462
ENSMUST00000119265 Gm14906-001 processed_pseudogene Mus_musculus 5e-27 124

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