C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440335 RP11-613F7.1-001 ENSG00000213087 9606 - 6:151225550-151225947 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryTestisENST00000440335
Transcript ID Kidney Ovary Testis
ENST00000440335 0.038±0.00 0.089±0.00 0.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EE CIL_0005EE_0001 CGP 6:150865549-151358557

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183090 Rps12l1-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000073926 Rps12-201 protein_coding Mus_musculus 0 494
ENSMUST00000086764 Rps12-ps3-201 protein_coding Mus_musculus 0 494
ENSMUST00000117447 Rps12-ps10-001 processed_pseudogene Mus_musculus 0 488
ENSMUST00000139165 Rps12-ps9-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000119773 Rps12-ps19-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000179356 Rps12-ps14-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000178365 Rps12-ps13-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000179567 Rps12-ps15-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000179020 Rps12-ps12-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000178427 Rps12-ps11-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000118529 Rps12-ps16-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000179067 Rps12-ps17-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000179420 Rps12-ps18-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000179239 Rps12-ps6-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000182321 Rps12l2-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000118272 Rps12-ps5-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000121168 Rps12-ps20-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000121980 Rps12-ps1-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000179414 Rps12-ps23-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000179382 Rps12-ps22-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000178172 Rps12-ps21-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000092231 Gm4925-001 transcribed_processed_pseudogene Mus_musculus 0 398
ENSMUST00000168843 Gm4925-002 processed_transcript Mus_musculus 0 398

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