C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: early B-cell factor 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000440978 EBF3-004 ENSG00000108001 9606 - 10:129837700-129842171 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000440978
Transcript ID Ovary Testis
ENST00000440978 0.716±0.00 1.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OP CIL_0007OP_0001 UCNEbase 10:128166009-130159815
CIL_00081R CIL_00081R_0001 VISTA 10:129302684-129904015
CIL_00097C CIL_00097C_0001 VISTA 10:129305804-129907046
CIL_0009BD CIL_0009BD_0001 VISTA 10:129347523-129949421
CIL_0008TP CIL_0008TP_0001 VISTA 10:129416557-130017922
CIL_0001LI CIL_0001LI_0001 CGP 10:129467184-129963841
CIL_0007UL CIL_0007UL_0001 VISTA 10:129592822-130194584

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168203 Ebf3-203 protein_coding Mus_musculus 0 769
ENSMUST00000169486 Ebf3-204 protein_coding Mus_musculus 0 769
ENSMUST00000106118 Ebf3-202 protein_coding Mus_musculus 0 769
ENSMUST00000033378 Ebf3-201 protein_coding Mus_musculus 0 427
ENSDART00000138241 ebf3-002 protein_coding Danio_rerio 0 324

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