C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | leucine-rich repeats and calponin homology (CH) domain containing 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000441090  |
LRCH3-002 |
ENSG00000186001 |
9606 | + |
3:197791264-197883813  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006C7 | CIL_0006C7_0001 | CGP | 3:197737179-197888436 |
| CIL_0006C8 | CIL_0006C8_0001 | CGP | 3:197791226-197960142 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
| GO:0005737 | IDA | cytoplasm |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000165616
|
Lrch3-010 | protein_coding | Mus_musculus | 0 | 1945 |
|
ENSMUST00000023491
|
Lrch3-001 | protein_coding | Mus_musculus | 0 | 1031 |
|
ENSMUST00000135193
|
Lrch3-005 | protein_coding | Mus_musculus | 0 | 904 |
|
ENSMUST00000142290
|
Lrch3-004 | protein_coding | Mus_musculus | 0 | 645 |
|
ENSMUST00000156928
|
Lrch3-002 | retained_intron | Mus_musculus | 0 | 630 |
|
ENSMUST00000170201
|
Lrch3-012 | protein_coding | Mus_musculus | 0 | 630 |
|
ENSMUST00000171118
|
Lrch3-011 | protein_coding | Mus_musculus | 0 | 630 |
|
ENSMUST00000170899
|
Lrch3-008 | protein_coding | Mus_musculus | 0 | 630 |
|
ENSMUST00000165826
|
Lrch3-006 | protein_coding | Mus_musculus | 0 | 473 |
|
ENSMUST00000163428
|
Lrch3-009 | protein_coding | Mus_musculus | 0 | 403 |
|
ENSMUST00000164486
|
Lrch3-007 | nonsense_mediated_decay | Mus_musculus | 0 | 342 |
|
ENSMUST00000133399
|
Lrch3-003 | processed_transcript | Mus_musculus | 0 | 276 |
