C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: argininosuccinate synthetase 1 pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441309 ASS1P11-001 ENSG00000225308 9606 - 7:21220213-21221428 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000441309
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000441309 0.171±0.00 0.017±0.00 0.876±0.00 0.399±0.00 0.154±0.00 0.089±0.00 0.183±0.00 0.246±0.00 0.032±0.00 0.509±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QC CIL_0007QC_0001 VISTA 7:20658049-21259483
CIL_0008NJ CIL_0008NJ_0001 VISTA 7:20663661-21265131
CIL_0008EN CIL_0008EN_0001 VISTA 7:20679932-21281581
CIL_0008JT CIL_0008JT_0001 VISTA 7:20741182-21342467
CIL_0007T9 CIL_0007T9_0001 VISTA 7:20744723-21345841
CIL_0007P2 CIL_0007P2_0001 UCNEbase 7:20790061-21278350
CIL_0008EX CIL_0008EX_0001 VISTA 7:20900156-21501303

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053865 Gm5424-201 protein_coding Mus_musculus 0 1144
ENSMUST00000102840 Ass1-001 protein_coding Mus_musculus 0 1133
ENSMUST00000126474 Ass1-002 processed_transcript Mus_musculus 0 289

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