C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Holliday junction recognition protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441687 HJURP-202 ENSG00000123485 9606 - 2:233836701-233854566 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverMusclePlacentaENST00000441687
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Muscle Placenta
ENST00000441687 0.102±0.00 0.020±0.00 0.029±0.02 0.186±0.08 0.407±0.00 0.043±0.00 0.018±0.00 0.004±0.00 0.514±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001B0 CIL_0001B0_0001 CGP 2:233760248-233833423
CIL_0007H9 CIL_0007H9_0001 CGP 2:233775679-233854566
CIL_0007H4 CIL_0007H4_0001 CGP 2:233833416-234019522

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IDA chromosome, centromeric region
GO:0000777 IDA condensed chromosome kinetochore
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006334 TAS nucleosome assembly
GO:0007049 IEA cell cycle
GO:0007059 IMP chromosome segregation
GO:0034080 IMP CENP-A containing nucleosome assembly
GO:0042393 IEA:IPI histone binding
GO:0042802 IPI identical protein binding
GO:0043254 IDA regulation of protein complex assembly
GO:0051101 IDA regulation of DNA binding

Homologs

No Homologs available.

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