C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442505 ST13P19-001 ENSG00000228110 9606 - 1:210265636-210267241 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainLungMuscleOvaryPlacentaENST00000442505
Transcript ID Adrenal Brain Lung Muscle Ovary Placenta
ENST00000442505 0.012±0.00 0.013±0.00 0.012±0.00 0.121±0.00 0.090±0.04 0.045±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SY CIL_0007SY_0001 VISTA 1:209936500-210537428
CIL_0008VU CIL_0008VU_0001 VISTA 1:209960353-210563913
CIL_0008NN CIL_0008NN_0001 VISTA 1:209988044-210589005
CIL_0007QS CIL_0007QS_0001 VISTA 1:209991066-210593949
CIL_0009DF CIL_0009DF_0001 VISTA 1:210001167-210602348
CIL_0008NP CIL_0008NP_0001 VISTA 1:210011034-210611642

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172107 St13-001 protein_coding Mus_musculus 0 1136
ENSMUST00000023039 St13-004 protein_coding Mus_musculus 0 1051
ENSMUST00000165582 St13-005 protein_coding Mus_musculus 0 449

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