C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microRNA 4426
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443181 MIR4426-001 ENSG00000231767 9606 + 1:192716183-192716648 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443181
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443181 0.084±0.00 0.526±0.00 0.143±0.06 0.120±0.03 0.107±0.00 0.079±0.00 0.144±0.00 0.105±0.00 0.076±0.01 0.129±0.00 0.471±0.39 0.137±0.05 0.125±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BS CIL_0001BS_0002 CGP 1:192636138-192812283

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 628
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 628
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 623
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 540
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 0 472
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000160015 Gm16139-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000120658 Gm13622-001 processed_pseudogene Mus_musculus 0 422
ENSMUST00000185489 RP23-125B4.3-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 372
ENSMUST00000181136 Gm27018-001 processed_pseudogene Mus_musculus 0 289
ENSMUST00000117540 Gm13428-001 processed_pseudogene Mus_musculus 3e-35 152
ENSMUST00000143418 Rps27a-001 processed_transcript Mus_musculus 0.000000000000003 86

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