C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000443953 ATIC-002 ENSG00000138363 9606 + 2:215312072-215349763 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000443953
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000443953 8.163±0.00 13.302±0.00 20.954±0.00 10.991±0.00 6.616±0.00 7.568±0.00 11.988±0.00 8.222±0.00 3.175±0.00 4.070±0.00 5.178±0.95 6.367±0.00 23.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MH CIL_0005MH_0001 CGP 2:214931542-215349773
CIL_0005MI CIL_0005MI_0001 CGP 2:215311817-215436172

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027384 Atic-001 protein_coding Mus_musculus 0 1873
ENSMUST00000155769 Atic-004 retained_intron Mus_musculus 0 1336
ENSMUST00000119845 Gm5721-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000154855 Atic-005 retained_intron Mus_musculus 0 429

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