C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prolactin regulatory element binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000444452 PREB-002 ENSG00000138073 9606 - 2:27130765-27134615 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444452
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444452 3.699±0.00 1.869±0.00 6.898±0.00 3.122±0.81 14.695±0.00 6.181±4.92 11.416±0.00 16.050±0.00 17.445±0.00 5.721±1.27 12.040±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074840 Preb-001 protein_coding Mus_musculus 0 1181
ENSMUST00000088063 Preb-002 protein_coding Mus_musculus 0 859
ENSMUST00000156351 Preb-008 retained_intron Mus_musculus 0 734
ENSMUST00000155946 Preb-012 retained_intron Mus_musculus 0 339
ENSMUST00000128093 Preb-010 processed_transcript Mus_musculus 0 327
ENSMUST00000135863 Preb-009 retained_intron Mus_musculus 0 244
ENSMUST00000127081 Preb-003 processed_transcript Mus_musculus 0 209
ENSMUST00000123211 Preb-006 retained_intron Mus_musculus 0 209
ENSMUST00000125986 Preb-005 processed_transcript Mus_musculus 0 209
ENSMUST00000125524 Preb-007 retained_intron Mus_musculus 5e-34 150
ENSMUST00000148214 Preb-011 protein_coding Mus_musculus 8e-27 126

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