C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TIA1 cytotoxic granule-associated RNA binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000445587  |
TIA1-003 |
ENSG00000116001 |
9606 | - |
2:70212317-70248610  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089T | CIL_00089T_0001 | VISTA | 2:69833131-70434482 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000130967
|
Tia1-002 | protein_coding | Mus_musculus | 0 | 1842 |
|
ENSMUST00000095752
|
Tia1-003 | protein_coding | Mus_musculus | 0 | 1158 |
|
ENSMUST00000113713
|
Tia1-007 | protein_coding | Mus_musculus | 0 | 1114 |
|
ENSMUST00000134142
|
Tia1-008 | retained_intron | Mus_musculus | 0 | 682 |
|
ENSMUST00000113712
|
Tia1-005 | nonsense_mediated_decay | Mus_musculus | 0 | 682 |
|
ENSMUST00000095753
|
Tia1-001 | protein_coding | Mus_musculus | 0 | 682 |
|
ENSMUST00000154438
|
Tia1-022 | processed_transcript | Mus_musculus | 0 | 640 |
|
ENSMUST00000095754
|
Tia1-010 | protein_coding | Mus_musculus | 0 | 640 |
|
ENSMUST00000148728
|
Tia1-012 | processed_transcript | Mus_musculus | 0 | 630 |
|
ENSMUST00000156762
|
Tia1-017 | processed_transcript | Mus_musculus | 0 | 614 |
|
ENSMUST00000139928
|
Tia1-014 | processed_transcript | Mus_musculus | 0 | 520 |
|
ENSMUST00000143718
|
Tia1-013 | processed_transcript | Mus_musculus | 0 | 503 |
|
ENSMUST00000124683
|
Tia1-024 | processed_transcript | Mus_musculus | 0 | 473 |
|
ENSMUST00000113708
|
Tia1-009 | protein_coding | Mus_musculus | 0 | 435 |
|
ENSMUST00000136387
|
Tia1-011 | retained_intron | Mus_musculus | 0 | 429 |
|
ENSMUST00000126404
|
Tia1-019 | processed_transcript | Mus_musculus | 0 | 405 |
|
ENSMUST00000141960
|
Tia1-006 | retained_intron | Mus_musculus | 0 | 313 |
|
ENSMUST00000149270
|
Tia1-023 | retained_intron | Mus_musculus | 0 | 263 |
|
ENSMUST00000123267
|
Tia1-021 | processed_transcript | Mus_musculus | 0 | 204 |
|
ENSMUST00000154983
|
Tia1-004 | processed_transcript | Mus_musculus | 3e-39 | 167 |
|
ENSMUST00000152852
|
Tia1-020 | retained_intron | Mus_musculus | 1e-38 | 165 |
|
ENSMUST00000123002
|
Tia1-018 | processed_transcript | Mus_musculus | 3e-25 | 121 |
