C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445629 AC104389.32-001 ENSG00000236248 9606 + 11:5362615-5362849 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleTestisENST00000445629
Transcript ID Brain Muscle Testis
ENST00000445629 0.080±0.00 0.062±0.00 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0001 VISTA 11:4975331-5576811
CIL_0003R8 CIL_0003R8_0002 CGP 11:5248083-5645789
CIL_0004CP CIL_0004CP_0001 CGP 11:5268345-5505617
CIL_0004DO CIL_0004DO_0001 CGP 11:5351508-5390379

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040372 Tmem258-001 protein_coding Mus_musculus 0 250
ENSMUST00000166412 Tmem258-201 protein_coding Mus_musculus 0 246
ENSMUST00000153854 Tmem258-002 processed_transcript Mus_musculus 0 246
ENSMUST00000127878 Tmem258-003 retained_intron Mus_musculus 6e-34 147

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