C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MTCL1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446207 MTCL1P1-001 ENSG00000226554 9606 + 13:70923664-70924455 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000446207
Transcript ID Testis
ENST00000446207 0.172±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VF CIL_0003VF_0001 CGP 13:69700594-71867192
CIL_0008W9 CIL_0008W9_0001 VISTA 13:70469477-71070736
CIL_00083C CIL_00083C_0001 VISTA 13:70483961-71085375
CIL_0008HU CIL_0008HU_0001 VISTA 13:70658905-71260063
CIL_0007L7 CIL_0007L7_0001 UCNEbase 13:70667313-71866528
CIL_0008WD CIL_0008WD_0001 VISTA 13:70848326-71450830
CIL_0008WC CIL_0008WC_0001 VISTA 13:70900716-71501236
CIL_000957 CIL_000957_0001 VISTA 13:70919290-71521202
CIL_000844 CIL_000844_0001 VISTA 13:70919510-71520241

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145347 Mtcl1-003 protein_coding Mus_musculus 0 604
ENSMUST00000086693 Mtcl1-001 protein_coding Mus_musculus 0 604
ENSMUST00000177034 Mtcl1-011 protein_coding Mus_musculus 0 582
ENSMUST00000097291 Mtcl1-002 protein_coding Mus_musculus 0 582
ENSDART00000063146 MTCL1 (1 of 2)-201 protein_coding Danio_rerio 4e-21 106

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