C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: trinucleotide repeat containing 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446273 TNRC6B-003 ENSG00000100354 9606 + 22:40265003-40321799 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverTestisENST00000446273
Transcript ID Breast Liver Testis
ENST00000446273 2.315±0.00 3.083±0.00 3.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W3 CIL_0005W3_0001 CGP 22:39994949-40335808
CIL_0006F2 CIL_0006F2_0001 CGP 22:40044817-40369367

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067689 Tnrc6b-201 protein_coding Mus_musculus 0 6270
ENSDART00000153428 tnrc6b-001 protein_coding Danio_rerio 8e-20 104
ENSDART00000114402 tnrc6b-201 protein_coding Danio_rerio 1e-18 100

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