C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interleukin 1 receptor accessory protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447382 IL1RAP-005 ENSG00000196083 9606 + 3:190514059-190651512 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000447382
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000447382 0.740±0.00 0.747±0.00 1.295±0.00 0.360±0.00 0.224±0.00 0.524±0.00 2.658±0.00 2.451±0.00 2.787±3.13 6.016±1.80 0.740±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DL CIL_0000DL_0001 CGP 3:190428655-190659750
CIL_0000DM CIL_0000DM_0001 CGP 3:190514051-190892429

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 TAS signal transducer activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006461 TAS protein complex assembly
GO:0006954 TAS inflammatory response
GO:0006955 TAS immune response
GO:0007165 IEA signal transduction
GO:0016020 IDA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023156 Il1rap-004 protein_coding Mus_musculus 0 1951
ENSMUST00000174171 Il1rap-006 nonsense_mediated_decay Mus_musculus 0 887
ENSMUST00000096129 Il1rap-001 protein_coding Mus_musculus 0.00000000000003 86

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