C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447422 RP11-109P14.8-001 ENSG00000235673 9606 + 1:37840986-37841676 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartOvaryTestisENST00000447422
Transcript ID Breast Heart Ovary Testis
ENST00000447422 0.093±0.00 0.026±0.00 0.211±0.00 0.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016
CIL_0007UI CIL_0007UI_0001 VISTA 1:37794522-38395934

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 523
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 508
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 508
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 508
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 508
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 501
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 492
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 486
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 479
ENSMUST00000121190 Gm7860-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 460
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 459
ENSMUST00000121420 Gm12176-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000117512 Gm7222-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000169235 Gm7502-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 429
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000119871 Gm12733-001 processed_pseudogene Mus_musculus 0 416
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 411
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 411
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 411
ENSMUST00000119578 Gm11643-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121414 Rps2-ps9-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000121811 Gm6881-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000117955 Gm14263-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000122809 Rps2-004 retained_intron Mus_musculus 0 355
ENSMUST00000119217 Gm8302-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000190239 RP23-16N14.5-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000119349 Gm11524-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000120471 Gm11888-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 7.00649e-43 178
ENSMUST00000129984 Rps2-007 retained_intron Mus_musculus 4.00001e-40 169
ENSMUST00000117457 Gm11540-001 unprocessed_pseudogene Mus_musculus 2e-19 100

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