C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 beta 2 pseudogene 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447718 EEF1B2P3-001 ENSG00000232472 9606 - X:24788392-24789069 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000447718
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000447718 0.081±0.00 0.283±0.00 0.088±0.00 1.224±0.00 0.268±0.00 0.159±0.04 0.059±0.00 0.085±0.00 0.115±0.00 0.675±0.53 0.156±0.08 0.048±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084H CIL_00084H_0001 VISTA X:24441239-25041771
CIL_0008NE CIL_0008NE_0001 VISTA X:24504486-25106506
CIL_0008NF CIL_0008NF_0001 VISTA X:24546114-25147616
CIL_0008NL CIL_0008NL_0001 VISTA X:24576218-25177967
CIL_0008NM CIL_0008NM_0001 VISTA X:24597265-25200155
CIL_0008W8 CIL_0008W8_0001 VISTA X:24627531-25229450
CIL_0008W7 CIL_0008W7_0001 VISTA X:24689762-25291464
CIL_0001X9 CIL_0001X9_0002 CGP X:24693919-25015948
CIL_0008W6 CIL_0008W6_0001 VISTA X:24698950-25300639
CIL_0009CI CIL_0009CI_0001 VISTA X:24700754-25302415

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129339 Eef1b2-001 protein_coding Mus_musculus 0 837
ENSMUST00000135877 Eef1b2-004 nonsense_mediated_decay Mus_musculus 0 654
ENSMUST00000027108 Eef1b2-006 nonsense_mediated_decay Mus_musculus 0 645
ENSMUST00000188524 Eef1b2-009 protein_coding Mus_musculus 0 569
ENSMUST00000142062 Eef1b2-002 nonsense_mediated_decay Mus_musculus 0 374
ENSMUST00000174890 Eef1b2-008 nonsense_mediated_decay Mus_musculus 0 270
ENSMUST00000126469 Eef1b2-007 processed_transcript Mus_musculus 0 270
ENSMUST00000126795 Eef1b2-003 nonsense_mediated_decay Mus_musculus 0 261
ENSMUST00000148553 Eef1b2-005 processed_transcript Mus_musculus 0 239

Loading