| Transcript ID | Brain | Liver | Lung |
|---|---|---|---|
| ENST00000447726 | 0.252±0.00 | 0.856±0.00 | 1.636±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | pre-B-cell leukemia homeobox 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000447726  |
PBX3-002 |
ENSG00000167081 |
9606 | + |
9:125748199-125967377  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00080V | CIL_00080V_0001 | VISTA | 9:125333480-125934659 |
| CIL_0008LX | CIL_0008LX_0001 | VISTA | 9:125343868-125945374 |
| CIL_0007LN | CIL_0007LN_0001 | UCNEbase | 9:125397521-126491100 |
| CIL_0008Q0 | CIL_0008Q0_0001 | VISTA | 9:125454655-126056093 |
| CIL_0008GT | CIL_0008GT_0001 | VISTA | 9:125458713-126060374 |
| CIL_000961 | CIL_000961_0001 | VISTA | 9:125460596-126063163 |
| CIL_0008R5 | CIL_0008R5_0001 | VISTA | 9:125463069-126064935 |
| CIL_000848 | CIL_000848_0001 | VISTA | 9:125521677-126122201 |
| CIL_0008I6 | CIL_0008I6_0001 | VISTA | 9:125544240-126146071 |
| CIL_00086D | CIL_00086D_0001 | VISTA | 9:125577886-126179048 |
| CIL_0007YW | CIL_0007YW_0001 | VISTA | 9:125583183-126184818 |
| CIL_0007QH | CIL_0007QH_0001 | VISTA | 9:125604132-126205273 |
| CIL_000849 | CIL_000849_0001 | VISTA | 9:125609586-126210723 |
| CIL_000960 | CIL_000960_0001 | VISTA | 9:125672879-126273895 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0007387 | TAS | anterior compartment pattern formation |
| GO:0007388 | TAS | posterior compartment specification |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000040638
|
Pbx3-001 | protein_coding | Mus_musculus | 0 | 2822 |
|
ENSMUST00000113132
|
Pbx3-002 | protein_coding | Mus_musculus | 0 | 1587 |
|
ENSMUST00000153278
|
Pbx3-003 | nonsense_mediated_decay | Mus_musculus | 0 | 1234 |
|
ENSMUST00000176213
|
Pbx3-010 | processed_transcript | Mus_musculus | 0 | 1171 |
|
ENSMUST00000143776
|
Pbx3-004 | nonsense_mediated_decay | Mus_musculus | 0 | 741 |
|
ENSMUST00000175855
|
Pbx3-006 | nonsense_mediated_decay | Mus_musculus | 0 | 737 |
|
ENSMUST00000138021
|
Pbx3-007 | protein_coding | Mus_musculus | 0 | 627 |
|
ENSMUST00000141653
|
Pbx3-009 | protein_coding | Mus_musculus | 0 | 553 |
|
ENSMUST00000127353
|
Pbx3-008 | protein_coding | Mus_musculus | 0 | 320 |
